Abstract: The proliferation of continuous streamflow monitoring and spatial data suitable for hydraulic modeling is increasing opportunities to use hydraulic habitat analysis to inform ecological models. However, species population and streamflow data exhibit high variability, making it challenging to identify hydrologic and hydraulic metrics that effectively correlate with ecological outcomes. Metric selection presents a challenge for informing environmental flow decisions and adaptive management of water infrastructure. This study applies models to characterize environmental flows with in-creasing model complexity, including the use of hydraulic models to estimate suitable habitat areas at a given flow. The results are compared to field-measured fish outcomes over the same period using functional data analysis. The variance in model correlation with ecological outcomes aids in identifying the most effective environmental flow parameters while also indicating potential pitfalls from increasing model complexity. This analysis demonstrates techniques that synthesize environmental flows with available habitat analysis and validates the approach. The case study is based on the Rio Grande silvery minnow (Hybognathus amarus, minnow), an endangered fish species in the Middle Rio Grande. Analysis focused on different methods to quantify spring runoff coinciding with the inundation of floodplain nursery habitat necessary for the minnow’s larval and juvenile life stages.